Welcome!
On this page, you will find the latest information on SICOF. For our website, Click here
Link to our manual for SICOF interaction: Click here
Dear users,
Due to recent changes in our staff, we are experiencing severe delays in data delivery. We are working to alleviate these problems as soon as possible. If you are expecting a data delivery and you have not heard from us this week, please contact us as soon as possible on singlecellseq@ki.se and michael.vanlandewijck@ki.se. Thank you for your understanding.
With our best wishes,
SICOF
In 2021, the Single cell core facility for Flemingsberg campus (SICOF) was established as a new, state of the art core facility to support the Karolinska Institutet South Campus research community. Our goal is to facilitate the use of single cell/nuclei sequencing technologies for all researchers. We offer several pipelines for single cell analysis, ranging from small scale ultra-sensitive solutions like Smart-seq2/3 sequencing up to larger scale droplet-based sequencing. For the latter, we use the solutions provided by 10x Genomics and can thus provide assistance with all of 10x Genomics’ products, including single nuclei ATAC-seq and the newly released Single Cell Multiome ATAC + Gene Expression assay. In addition to that, we also provide the opportunity to use our pipelines for drug screening experiments (Drug-seq) and other custom solutions. We aim to provide all researchers with clustered data that can be interpreted and analyzed without the need for a bioinformatician.
We are a team of six members: One administrator, one bioinformatician, three research engineers and one head of facility. Our laboratory is equipped with high-precision dispensers/handlers, such as an Agilent Bravo, a Labcyte Echo 525 and several smaller-scale dispensers. For QC of single cell libraries, we have three Agilent Bioanalyzers and an Agilent Fragment Analyzer. We perform our sequencing on our own Illumina HiSeq3000, which is also available for customers to run their own libraries.
| Hours |
Location |
|
Monday - Friday 9:00AM - 16:00PM |
NEO, Blickagången 16 Floor 6, elevator S, room 6538 SE-141 57 Huddinge, Sweden |
Shipping address
OBS: Do not ship samples to us without filling in a sample submission request!
Single Cell Core (SICOF) Room 6538
Karolinska Institutet | Institutionen för Medicin Huddinge
Hälsovägen 7C
Neo, plan 8
141 57 Huddinge
Tel 46 (0)8 52 48 34 18
E-mail: singlecellseq@ki.se
| Name | Role | Phone | Location | |
|---|---|---|---|---|
| Single Cell Core (SICOF) mailbox |
0706579511
|
singlecellseq@ki.se
|
Room 7333, NEO, floor 7, elevator M1
|
|
| Michael Vanlandewijck |
Head of Facility
|
michael.vanlandewijck@ki.se
|
NEO, floor 7, elevator S
|
